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Use Jupyter to communicate your results

Description:

In this final step - how you document is up to you:

Start Jupyter and begin working through your results

  1. You can start your Jupyter lab with the following command
/opt/conda/bin/jupyter lab --no-browser --allow-root --ip=0.0.0.0 --NotebookApp.token='' --NotebookApp.password='' --notebook-dir='/scratch/reproducibility-tutorial/'

Exercise

The 5.10 version of snakemake has integration with Jupyter. how can you use this to blend the two? Install the new version of snakemake and try, see the snakemake docs for information on the notebook integration.


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